SubtiBank SubtiBank
yvdD [2017-8-11 16:0:3]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yvdD [2017-8-11 16:0:3]

putative lysine decarboxylase
locus
BSU34640
pI
5.09
mw
20.91 kDa
protein length
191 aa Sequence Blast
gene length
573 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,558,940 → 3,559,515

    The protein

    Protein family

  • UPF0717 family (according to Swiss-Prot)

    • Structure

  • [PDB|1T35]

    • Additional information

  • Detected in spores. [Pubmed|12480901]

    • Expression and Regulation

    Operons

    genes
    [gene|B9DA06BF3617B86AD12A703A36D8BA2E0091AC8B|yvdD]
    description
    [Pubmed|22383849]

    additional information

  • Putative NrdR-box located between [protein|search|YvdC] and [protein|search|YvdD], suggesting transcriptional regulation by NrdR ([protein|search|YtcG]). [Pubmed|15949864]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B629 (yvdD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1628 NBRP B. subtilis, Japan]

    • References

  • 12480901,15949864,22383849